Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.76■□□□□ 0.27
Xrn1P97789 Gm18986-201ENSMUST00000216029 1986 ntBASIC16.76■□□□□ 0.27
Xrn1P97789 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC16.76■□□□□ 0.27
Xrn1P97789 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrn1P97789 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrn1P97789 Gm13422-201ENSMUST00000118834 504 ntBASIC16.76■□□□□ 0.27
Xrn1P97789 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Xrn1P97789 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC16.76■□□□□ 0.27
Xrn1P97789 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Xrn1P97789 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC16.76■□□□□ 0.27
Xrn1P97789 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrn1P97789 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrn1P97789 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrn1P97789 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.76■□□□□ 0.27
Xrn1P97789 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xrn1P97789 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Xrn1P97789 Gm44106-201ENSMUST00000203153 1599 ntBASIC16.75■□□□□ 0.27
Xrn1P97789 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.75■□□□□ 0.27
Xrn1P97789 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Gm43242-201ENSMUST00000199507 1776 ntBASIC16.75■□□□□ 0.27
Xrn1P97789 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Gng5-ps-201ENSMUST00000120931 205 ntBASIC16.75■□□□□ 0.27
Xrn1P97789 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC16.75■□□□□ 0.27
Xrn1P97789 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Xrn1P97789 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Xrn1P97789 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Xrn1P97789 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.75■□□□□ 0.27
Xrn1P97789 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Xrn1P97789 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Xrn1P97789 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Xrn1P97789 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Gm7841-201ENSMUST00000122108 1629 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Xrn1P97789 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Gm9133-201ENSMUST00000118289 540 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Gm11957-201ENSMUST00000118304 779 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Gm9166-201ENSMUST00000120293 561 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Gm12712-201ENSMUST00000120676 801 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Xrn1P97789 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Gm25830-201ENSMUST00000158923 132 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Gm16167-201ENSMUST00000160428 1065 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Gm43854-201ENSMUST00000200418 394 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Gm43969-201ENSMUST00000204833 535 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC16.74■□□□□ 0.27
Xrn1P97789 Gm6653-201ENSMUST00000218063 1288 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC16.74■□□□□ 0.27
Xrn1P97789 Gm19692-201ENSMUST00000203856 2084 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Gm14005-210ENSMUST00000225087 1413 ntBASIC16.74■□□□□ 0.27
Xrn1P97789 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xrn1P97789 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Xrn1P97789 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Xrn1P97789 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrn1P97789 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Xrn1P97789 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Xrn1P97789 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Xrn1P97789 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
Xrn1P97789 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
Xrn1P97789 Gm6423-201ENSMUST00000204315 934 ntBASIC16.73■□□□□ 0.27
Xrn1P97789 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrn1P97789 AC122035.1-201ENSMUST00000227576 1016 ntBASIC16.73■□□□□ 0.27
Xrn1P97789 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC16.73■□□□□ 0.27
Xrn1P97789 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xrn1P97789 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Xrn1P97789 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Xrn1P97789 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms