Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Gm3551-201ENSMUST00000190750 664 ntBASIC15.1■□□□□ 0.01
Nkx2-3P97334 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.1■□□□□ 0.01
Nkx2-3P97334 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.1■□□□□ 0.01
Nkx2-3P97334 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Nkx2-3P97334 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm23272-201ENSMUST00000104053 129 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm13182-201ENSMUST00000122241 312 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm15744-201ENSMUST00000161734 213 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm3793-201ENSMUST00000204973 672 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 CT485606.1-201ENSMUST00000213187 878 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm2553-201ENSMUST00000215986 605 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm9873-201ENSMUST00000063891 1097 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 Gm5879-201ENSMUST00000089501 1209 ntBASIC15.09■□□□□ 0.01
Nkx2-3P97334 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nkx2-3P97334 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
Nkx2-3P97334 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-3P97334 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-3P97334 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-3P97334 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-3P97334 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-3P97334 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-3P97334 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nkx2-3P97334 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nkx2-3P97334 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nkx2-3P97334 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Nkx2-3P97334 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Gm13668-201ENSMUST00000119237 1001 ntBASIC15.08■□□□□ 0
Nkx2-3P97334 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nkx2-3P97334 Gm5100-201ENSMUST00000195631 589 ntBASIC15.08■□□□□ 0
Nkx2-3P97334 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC15.08■□□□□ 0
Nkx2-3P97334 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.08■□□□□ 0
Nkx2-3P97334 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 AC115122.1-201ENSMUST00000224850 1040 ntBASIC15.08■□□□□ 0
Nkx2-3P97334 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nkx2-3P97334 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Nkx2-3P97334 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nkx2-3P97334 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Nkx2-3P97334 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.08■□□□□ 0
Nkx2-3P97334 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms