Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CiitaP79621 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CiitaP79621 Gm9062-201ENSMUST00000117712 727 ntBASIC13.07□□□□□ -0.32
CiitaP79621 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.07□□□□□ -0.32
CiitaP79621 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.07□□□□□ -0.32
CiitaP79621 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.07□□□□□ -0.32
CiitaP79621 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CiitaP79621 Gm19353-201ENSMUST00000184561 445 ntBASIC13.07□□□□□ -0.32
CiitaP79621 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CiitaP79621 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.07□□□□□ -0.32
CiitaP79621 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
CiitaP79621 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CiitaP79621 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
CiitaP79621 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Gm8199-201ENSMUST00000121323 823 ntBASIC13.06□□□□□ -0.32
CiitaP79621 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.06□□□□□ -0.32
CiitaP79621 Gm4310-201ENSMUST00000177847 889 ntBASIC13.06□□□□□ -0.32
CiitaP79621 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.06□□□□□ -0.32
CiitaP79621 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.06□□□□□ -0.32
CiitaP79621 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CiitaP79621 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.06□□□□□ -0.32
CiitaP79621 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CiitaP79621 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CiitaP79621 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CiitaP79621 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
CiitaP79621 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.05□□□□□ -0.32
CiitaP79621 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.05□□□□□ -0.32
CiitaP79621 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CiitaP79621 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CiitaP79621 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CiitaP79621 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.05□□□□□ -0.32
CiitaP79621 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CiitaP79621 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
CiitaP79621 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CiitaP79621 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.05□□□□□ -0.32
CiitaP79621 Gm12036-201ENSMUST00000120008 530 ntBASIC13.05□□□□□ -0.32
CiitaP79621 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
CiitaP79621 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.05□□□□□ -0.32
CiitaP79621 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.05□□□□□ -0.32
CiitaP79621 Ighv1-48-201ENSMUST00000191795 294 ntBASIC13.05□□□□□ -0.32
CiitaP79621 Gm42599-201ENSMUST00000201308 469 ntBASIC13.05□□□□□ -0.32
CiitaP79621 Gm44100-201ENSMUST00000204329 436 ntBASIC13.05□□□□□ -0.32
CiitaP79621 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.05□□□□□ -0.32
CiitaP79621 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CiitaP79621 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.05□□□□□ -0.32
CiitaP79621 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CiitaP79621 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms