Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.05□□□□□ -0.32
PrkcbP68404 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.05□□□□□ -0.32
PrkcbP68404 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.05□□□□□ -0.32
PrkcbP68404 Gm7848-201ENSMUST00000210739 718 ntBASIC13.05□□□□□ -0.32
PrkcbP68404 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.05□□□□□ -0.32
PrkcbP68404 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.05□□□□□ -0.32
PrkcbP68404 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
PrkcbP68404 Gm5705-201ENSMUST00000066241 711 ntBASIC13.05□□□□□ -0.32
PrkcbP68404 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
PrkcbP68404 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.05□□□□□ -0.32
PrkcbP68404 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PrkcbP68404 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PrkcbP68404 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PrkcbP68404 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
PrkcbP68404 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.04□□□□□ -0.32
PrkcbP68404 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PrkcbP68404 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.04□□□□□ -0.32
PrkcbP68404 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
PrkcbP68404 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.04□□□□□ -0.32
PrkcbP68404 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
PrkcbP68404 Gm5369-201ENSMUST00000217499 588 ntBASIC13.04□□□□□ -0.32
PrkcbP68404 Nsd1-205ENSMUST00000224693 852 ntBASIC13.04□□□□□ -0.32
PrkcbP68404 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Gm21811-201ENSMUST00000096485 930 ntBASIC13.04□□□□□ -0.32
PrkcbP68404 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.04□□□□□ -0.32
PrkcbP68404 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.04□□□□□ -0.32
PrkcbP68404 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PrkcbP68404 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.04□□□□□ -0.32
PrkcbP68404 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PrkcbP68404 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PrkcbP68404 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PrkcbP68404 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PrkcbP68404 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
PrkcbP68404 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
PrkcbP68404 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
PrkcbP68404 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
PrkcbP68404 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 Gm15004-201ENSMUST00000119192 630 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.03□□□□□ -0.32
PrkcbP68404 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.03□□□□□ -0.32
PrkcbP68404 Gm27530-201ENSMUST00000184096 98 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 Gm27390-201ENSMUST00000184516 176 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 Gm28686-201ENSMUST00000187404 609 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Gm9797-202ENSMUST00000218003 294 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.03□□□□□ -0.32
PrkcbP68404 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
PrkcbP68404 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
PrkcbP68404 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PrkcbP68404 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.03□□□□□ -0.32
PrkcbP68404 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PrkcbP68404 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
PrkcbP68404 Map1b-203ENSMUST00000223725 2669 ntBASIC13.03□□□□□ -0.32
PrkcbP68404 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PrkcbP68404 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms