Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.04
Rpl39P62892 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Rpl39P62892 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Rpl39P62892 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Rpl39P62892 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rpl39P62892 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC8.58□□□□□ -1.04
Rpl39P62892 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC8.58□□□□□ -1.04
Rpl39P62892 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rpl39P62892 Gm8213-201ENSMUST00000118191 441 ntBASIC8.58□□□□□ -1.04
Rpl39P62892 Gm12363-201ENSMUST00000122250 668 ntBASIC8.58□□□□□ -1.04
Rpl39P62892 Gm10156-201ENSMUST00000122364 462 ntBASIC8.58□□□□□ -1.04
Rpl39P62892 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.58□□□□□ -1.04
Rpl39P62892 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC8.58□□□□□ -1.04
Rpl39P62892 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.58□□□□□ -1.04
Rpl39P62892 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.58□□□□□ -1.04
Rpl39P62892 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC8.58□□□□□ -1.04
Rpl39P62892 AC155252.1-201ENSMUST00000226462 1208 ntBASIC8.58□□□□□ -1.04
Rpl39P62892 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rpl39P62892 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Gm38140-201ENSMUST00000193617 2755 ntBASIC8.58□□□□□ -1.04
Rpl39P62892 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Rpl39P62892 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC8.58□□□□□ -1.04
Rpl39P62892 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Rpl39P62892 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rpl39P62892 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rpl39P62892 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.57□□□□□ -1.04
Rpl39P62892 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Gm12203-201ENSMUST00000118235 598 ntBASIC8.57□□□□□ -1.04
Rpl39P62892 Gm12209-201ENSMUST00000120089 596 ntBASIC8.57□□□□□ -1.04
Rpl39P62892 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC8.57□□□□□ -1.04
Rpl39P62892 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Gm5637-201ENSMUST00000153890 1119 ntBASIC8.57□□□□□ -1.04
Rpl39P62892 Gm8810-201ENSMUST00000172895 754 ntBASIC8.57□□□□□ -1.04
Rpl39P62892 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC8.57□□□□□ -1.04
Rpl39P62892 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms