Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.95□□□□□ -0.66
Lsm3P62311 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.95□□□□□ -0.66
Lsm3P62311 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.95□□□□□ -0.66
Lsm3P62311 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Lsm3P62311 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Lsm3P62311 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.95□□□□□ -0.66
Lsm3P62311 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.95□□□□□ -0.66
Lsm3P62311 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Lsm3P62311 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.95□□□□□ -0.66
Lsm3P62311 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.95□□□□□ -0.66
Lsm3P62311 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.95□□□□□ -0.66
Lsm3P62311 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.95□□□□□ -0.66
Lsm3P62311 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.95□□□□□ -0.66
Lsm3P62311 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Lsm3P62311 Gm9063-201ENSMUST00000223299 582 ntBASIC10.95□□□□□ -0.66
Lsm3P62311 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.95□□□□□ -0.66
Lsm3P62311 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Lsm3P62311 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Lsm3P62311 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Lsm3P62311 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Lsm3P62311 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm3P62311 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.94□□□□□ -0.66
Lsm3P62311 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Lsm3P62311 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.94□□□□□ -0.66
Lsm3P62311 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Lsm3P62311 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Rmrp-201ENSMUST00000157463 271 ntBASIC10.94□□□□□ -0.66
Lsm3P62311 Gm21854-201ENSMUST00000179901 471 ntBASIC10.94□□□□□ -0.66
Lsm3P62311 Gm9022-201ENSMUST00000182482 992 ntBASIC10.94□□□□□ -0.66
Lsm3P62311 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.94□□□□□ -0.66
Lsm3P62311 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.94□□□□□ -0.66
Lsm3P62311 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.94□□□□□ -0.66
Lsm3P62311 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Lsm3P62311 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Lsm3P62311 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lsm3P62311 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Lsm3P62311 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Lsm3P62311 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Lsm3P62311 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm3P62311 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Lsm3P62311 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lsm3P62311 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lsm3P62311 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Lsm3P62311 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Lsm3P62311 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.93□□□□□ -0.66
Lsm3P62311 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Lsm3P62311 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Lsm3P62311 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms