Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm44958-201ENSMUST00000203734 736 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.74□□□□□ -0.69
Sf3b6P59708 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm25857-201ENSMUST00000082788 129 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm26232-201ENSMUST00000083360 166 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.74□□□□□ -0.69
Sf3b6P59708 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sf3b6P59708 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sf3b6P59708 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm12314-201ENSMUST00000118104 538 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm12203-201ENSMUST00000118235 598 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm12209-201ENSMUST00000120089 596 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm8018-201ENSMUST00000173536 789 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm37319-201ENSMUST00000193500 636 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm6007-201ENSMUST00000208170 823 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.73□□□□□ -0.69
Sf3b6P59708 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.73□□□□□ -0.69
Sf3b6P59708 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Sf3b6P59708 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sf3b6P59708 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.72□□□□□ -0.69
Sf3b6P59708 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sf3b6P59708 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.72□□□□□ -0.69
Sf3b6P59708 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms