Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.13□□□□□ -0.47
SmoP56726 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.13□□□□□ -0.47
SmoP56726 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Gm12857-201ENSMUST00000117678 592 ntBASIC12.13□□□□□ -0.47
SmoP56726 Gm12566-201ENSMUST00000121479 359 ntBASIC12.13□□□□□ -0.47
SmoP56726 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.13□□□□□ -0.47
SmoP56726 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.13□□□□□ -0.47
SmoP56726 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.13□□□□□ -0.47
SmoP56726 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.13□□□□□ -0.47
SmoP56726 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
SmoP56726 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Gm21811-201ENSMUST00000096485 930 ntBASIC12.13□□□□□ -0.47
SmoP56726 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.13□□□□□ -0.47
SmoP56726 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.13□□□□□ -0.47
SmoP56726 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SmoP56726 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SmoP56726 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SmoP56726 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.12□□□□□ -0.47
SmoP56726 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.12□□□□□ -0.47
SmoP56726 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Gm11660-201ENSMUST00000120955 412 ntBASIC12.12□□□□□ -0.47
SmoP56726 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.12□□□□□ -0.47
SmoP56726 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.12□□□□□ -0.47
SmoP56726 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SmoP56726 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.12□□□□□ -0.47
SmoP56726 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Mir6979-201ENSMUST00000183927 56 ntBASIC12.12□□□□□ -0.47
SmoP56726 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Gm5369-201ENSMUST00000217499 588 ntBASIC12.12□□□□□ -0.47
SmoP56726 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.12□□□□□ -0.47
SmoP56726 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.12□□□□□ -0.47
SmoP56726 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.12□□□□□ -0.47
SmoP56726 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.12□□□□□ -0.47
SmoP56726 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.12□□□□□ -0.47
SmoP56726 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SmoP56726 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SmoP56726 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SmoP56726 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SmoP56726 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.11□□□□□ -0.47
SmoP56726 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SmoP56726 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SmoP56726 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SmoP56726 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms