Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.68□□□□□ -0.38
NcanP55066 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.68□□□□□ -0.38
NcanP55066 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
NcanP55066 Gm2345-201ENSMUST00000193451 589 ntBASIC12.68□□□□□ -0.38
NcanP55066 Gm6423-201ENSMUST00000204315 934 ntBASIC12.68□□□□□ -0.38
NcanP55066 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.68□□□□□ -0.38
NcanP55066 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.68□□□□□ -0.38
NcanP55066 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC12.68□□□□□ -0.38
NcanP55066 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NcanP55066 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Gm26035-201ENSMUST00000083065 308 ntBASIC12.68□□□□□ -0.38
NcanP55066 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NcanP55066 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NcanP55066 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.68□□□□□ -0.38
NcanP55066 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NcanP55066 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NcanP55066 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NcanP55066 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NcanP55066 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.67□□□□□ -0.38
NcanP55066 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NcanP55066 Gm25053-201ENSMUST00000103982 133 ntBASIC12.67□□□□□ -0.38
NcanP55066 Gm25922-201ENSMUST00000104281 130 ntBASIC12.67□□□□□ -0.38
NcanP55066 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.67□□□□□ -0.38
NcanP55066 Gm11244-201ENSMUST00000121243 237 ntBASIC12.67□□□□□ -0.38
NcanP55066 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.67□□□□□ -0.38
NcanP55066 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.67□□□□□ -0.38
NcanP55066 Gm24679-201ENSMUST00000158762 111 ntBASIC12.67□□□□□ -0.38
NcanP55066 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.67□□□□□ -0.38
NcanP55066 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.67□□□□□ -0.38
NcanP55066 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 Gm37851-201ENSMUST00000193871 889 ntBASIC12.67□□□□□ -0.38
NcanP55066 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Gm25053-202ENSMUST00000199731 132 ntBASIC12.67□□□□□ -0.38
NcanP55066 Gm6108-201ENSMUST00000208365 367 ntBASIC12.67□□□□□ -0.38
NcanP55066 Gm2553-201ENSMUST00000215986 605 ntBASIC12.67□□□□□ -0.38
NcanP55066 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NcanP55066 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NcanP55066 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NcanP55066 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NcanP55066 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Gm13171-201ENSMUST00000117233 391 ntBASIC12.66□□□□□ -0.38
NcanP55066 Gm11500-201ENSMUST00000118237 601 ntBASIC12.66□□□□□ -0.38
NcanP55066 Gm12663-201ENSMUST00000118481 958 ntBASIC12.66□□□□□ -0.38
NcanP55066 Gm11952-201ENSMUST00000121172 821 ntBASIC12.66□□□□□ -0.38
NcanP55066 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
NcanP55066 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NcanP55066 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
NcanP55066 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Gm9081-201ENSMUST00000182346 991 ntBASIC12.66□□□□□ -0.38
NcanP55066 Gm8824-201ENSMUST00000182962 990 ntBASIC12.66□□□□□ -0.38
NcanP55066 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NcanP55066 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms