Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacnb3P54285 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacnb3P54285 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacnb3P54285 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cacnb3P54285 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cacnb3P54285 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.05□□□□□ -0.16
Cacnb3P54285 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm1848-201ENSMUST00000120711 789 ntBASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm22138-201ENSMUST00000158748 128 ntBASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm25072-201ENSMUST00000175233 235 ntBASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm28388-201ENSMUST00000186262 437 ntBASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm9645-201ENSMUST00000197131 792 ntBASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.05□□□□□ -0.16
Cacnb3P54285 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.05□□□□□ -0.16
Cacnb3P54285 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.05□□□□□ -0.16
Cacnb3P54285 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.05□□□□□ -0.16
Cacnb3P54285 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.05□□□□□ -0.16
Cacnb3P54285 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cacnb3P54285 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.05□□□□□ -0.16
Cacnb3P54285 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cacnb3P54285 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Gm12795-201ENSMUST00000117594 539 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.04□□□□□ -0.16
Cacnb3P54285 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacnb3P54285 Gm23045-201ENSMUST00000175041 96 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Gm8492-201ENSMUST00000182375 987 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Gm9358-201ENSMUST00000183067 927 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Gm38117-201ENSMUST00000194653 939 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Gm42657-201ENSMUST00000201746 211 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.04□□□□□ -0.16
Cacnb3P54285 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Cacnb3P54285 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cacnb3P54285 Cog3-203ENSMUST00000227473 4197 ntBASIC14.04□□□□□ -0.16
Cacnb3P54285 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gm13937-201ENSMUST00000121000 988 ntBASIC14.03□□□□□ -0.16
Cacnb3P54285 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gm23153-201ENSMUST00000175323 313 ntBASIC14.03□□□□□ -0.16
Cacnb3P54285 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Mir6998-201ENSMUST00000183343 64 ntBASIC14.03□□□□□ -0.16
Cacnb3P54285 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cacnb3P54285 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacnb3P54285 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms