Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Fdft1P53798 Gm11793-201ENSMUST00000120433 981 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Gm17420-201ENSMUST00000164753 153 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.09□□□□□ -0.47
Fdft1P53798 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Gm42627-201ENSMUST00000197347 224 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Gm42937-201ENSMUST00000197360 752 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Gm18054-201ENSMUST00000207539 555 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Gm8227-201ENSMUST00000223306 571 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.09□□□□□ -0.47
Fdft1P53798 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.09□□□□□ -0.47
Fdft1P53798 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Fdft1P53798 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Fdft1P53798 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Fdft1P53798 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Fdft1P53798 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Fdft1P53798 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.08□□□□□ -0.48
Fdft1P53798 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Fdft1P53798 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Fdft1P53798 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Gm4034-201ENSMUST00000187674 480 ntBASIC12.08□□□□□ -0.48
Fdft1P53798 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Fdft1P53798 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Gm43118-201ENSMUST00000199149 775 ntBASIC12.08□□□□□ -0.48
Fdft1P53798 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.08□□□□□ -0.48
Fdft1P53798 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.08□□□□□ -0.48
Fdft1P53798 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Fdft1P53798 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.08□□□□□ -0.48
Fdft1P53798 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Fdft1P53798 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Fdft1P53798 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.08□□□□□ -0.48
Fdft1P53798 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.08□□□□□ -0.48
Fdft1P53798 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fdft1P53798 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
Fdft1P53798 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Fdft1P53798 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Gm25043-201ENSMUST00000158604 212 ntBASIC12.07□□□□□ -0.48
Fdft1P53798 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.07□□□□□ -0.48
Fdft1P53798 Gm29396-201ENSMUST00000185659 716 ntBASIC12.07□□□□□ -0.48
Fdft1P53798 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.07□□□□□ -0.48
Fdft1P53798 Gm37489-201ENSMUST00000191883 159 ntBASIC12.07□□□□□ -0.48
Fdft1P53798 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.07□□□□□ -0.48
Fdft1P53798 Gm5186-201ENSMUST00000218781 920 ntBASIC12.07□□□□□ -0.48
Fdft1P53798 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fdft1P53798 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms