Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.35□□□□□ -0.43
Sox1P53783 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox1P53783 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox1P53783 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox1P53783 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.35□□□□□ -0.43
Sox1P53783 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox1P53783 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox1P53783 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.35□□□□□ -0.43
Sox1P53783 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.35□□□□□ -0.43
Sox1P53783 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.34□□□□□ -0.43
Sox1P53783 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox1P53783 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sox1P53783 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.34□□□□□ -0.43
Sox1P53783 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Gm16459-201ENSMUST00000121443 686 ntBASIC12.34□□□□□ -0.43
Sox1P53783 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.34□□□□□ -0.43
Sox1P53783 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.34□□□□□ -0.43
Sox1P53783 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox1P53783 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sox1P53783 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox1P53783 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Sox1P53783 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.34□□□□□ -0.43
Sox1P53783 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox1P53783 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Sox1P53783 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox1P53783 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox1P53783 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sox1P53783 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox1P53783 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox1P53783 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Sox1P53783 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.33□□□□□ -0.44
Sox1P53783 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox1P53783 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Sox1P53783 Gm11500-201ENSMUST00000118237 601 ntBASIC12.33□□□□□ -0.44
Sox1P53783 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.33□□□□□ -0.44
Sox1P53783 Gm23119-201ENSMUST00000158610 140 ntBASIC12.33□□□□□ -0.44
Sox1P53783 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox1P53783 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox1P53783 Gm9162-201ENSMUST00000182081 991 ntBASIC12.33□□□□□ -0.44
Sox1P53783 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.33□□□□□ -0.44
Sox1P53783 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms