Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Gm5419-201ENSMUST00000119301 527 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.94□□□□□ -0.5
Pdx1P52946 Gm5706-201ENSMUST00000181525 993 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.94□□□□□ -0.5
Pdx1P52946 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Gm38241-201ENSMUST00000192641 898 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 Gm44262-201ENSMUST00000204969 372 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.94□□□□□ -0.5
Pdx1P52946 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 Gm17931-201ENSMUST00000208132 634 ntBASIC11.94□□□□□ -0.5
Pdx1P52946 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.94□□□□□ -0.5
Pdx1P52946 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Pdx1P52946 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Pdx1P52946 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.94□□□□□ -0.5
Pdx1P52946 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Pdx1P52946 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Pdx1P52946 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pdx1P52946 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.93□□□□□ -0.5
Pdx1P52946 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdx1P52946 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pdx1P52946 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Pdx1P52946 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Gm26361-201ENSMUST00000158868 186 ntBASIC11.93□□□□□ -0.5
Pdx1P52946 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pdx1P52946 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdx1P52946 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.93□□□□□ -0.5
Pdx1P52946 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdx1P52946 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pdx1P52946 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.93□□□□□ -0.5
Pdx1P52946 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Pdx1P52946 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pdx1P52946 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Pdx1P52946 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Pdx1P52946 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pdx1P52946 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.92□□□□□ -0.5
Pdx1P52946 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Pdx1P52946 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.92□□□□□ -0.5
Pdx1P52946 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.92□□□□□ -0.5
Pdx1P52946 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pdx1P52946 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Gm4607-201ENSMUST00000206649 577 ntBASIC11.92□□□□□ -0.5
Pdx1P52946 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pdx1P52946 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.92□□□□□ -0.5
Pdx1P52946 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Gm5455-201ENSMUST00000058710 715 ntBASIC11.92□□□□□ -0.5
Pdx1P52946 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pdx1P52946 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms