Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 Gm18734-201ENSMUST00000172937 808 ntBASIC11.48□□□□□ -0.57
RoraP51448 Gm28071-201ENSMUST00000190355 478 ntBASIC11.48□□□□□ -0.57
RoraP51448 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.48□□□□□ -0.57
RoraP51448 Gm43962-201ENSMUST00000203898 190 ntBASIC11.48□□□□□ -0.57
RoraP51448 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.48□□□□□ -0.57
RoraP51448 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.48□□□□□ -0.57
RoraP51448 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RoraP51448 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RoraP51448 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RoraP51448 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
RoraP51448 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.48□□□□□ -0.57
RoraP51448 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.48□□□□□ -0.57
RoraP51448 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RoraP51448 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RoraP51448 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.48□□□□□ -0.57
RoraP51448 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RoraP51448 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RoraP51448 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Cog3-203ENSMUST00000227473 4197 ntBASIC11.47□□□□□ -0.57
RoraP51448 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RoraP51448 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RoraP51448 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.47□□□□□ -0.57
RoraP51448 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.47□□□□□ -0.57
RoraP51448 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.47□□□□□ -0.57
RoraP51448 Gm43378-201ENSMUST00000199336 582 ntBASIC11.47□□□□□ -0.57
RoraP51448 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.47□□□□□ -0.57
RoraP51448 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.47□□□□□ -0.57
RoraP51448 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
RoraP51448 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RoraP51448 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RoraP51448 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
RoraP51448 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
RoraP51448 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.46□□□□□ -0.57
RoraP51448 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.46□□□□□ -0.57
RoraP51448 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RoraP51448 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
RoraP51448 Gm22133-201ENSMUST00000102082 109 ntBASIC11.46□□□□□ -0.57
RoraP51448 Gm11331-201ENSMUST00000119764 288 ntBASIC11.46□□□□□ -0.57
RoraP51448 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.46□□□□□ -0.57
RoraP51448 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
RoraP51448 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms