Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm12314-201ENSMUST00000118104 538 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm27486-201ENSMUST00000184923 80 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm9136-201ENSMUST00000193368 454 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm26232-201ENSMUST00000083360 166 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfx1P48377 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfx1P48377 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx1P48377 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rfx1P48377 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.41□□□□□ -0.1
Rfx1P48377 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx1P48377 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx1P48377 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfx1P48377 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx1P48377 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.4□□□□□ -0.1
Rfx1P48377 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfx1P48377 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Gm27839-201ENSMUST00000184242 106 ntBASIC14.4□□□□□ -0.1
Rfx1P48377 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.4□□□□□ -0.1
Rfx1P48377 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rfx1P48377 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rfx1P48377 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfx1P48377 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Rfx1P48377 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.4□□□□□ -0.1
Rfx1P48377 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.4□□□□□ -0.1
Rfx1P48377 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx1P48377 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfx1P48377 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx1P48377 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfx1P48377 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx1P48377 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Rfx1P48377 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx1P48377 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.39□□□□□ -0.11
Rfx1P48377 Gm8738-201ENSMUST00000172606 329 ntBASIC14.39□□□□□ -0.11
Rfx1P48377 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfx1P48377 Gm5904-201ENSMUST00000210286 865 ntBASIC14.39□□□□□ -0.11
Rfx1P48377 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.39□□□□□ -0.11
Rfx1P48377 Gm10076-201ENSMUST00000073238 384 ntBASIC14.39□□□□□ -0.11
Rfx1P48377 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx1P48377 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx1P48377 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rfx1P48377 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfx1P48377 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfx1P48377 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx1P48377 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfx1P48377 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx1P48377 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.39□□□□□ -0.11
Rfx1P48377 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Rfx1P48377 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx1P48377 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rfx1P48377 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx1P48377 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx1P48377 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx1P48377 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx1P48377 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx1P48377 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx1P48377 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfx1P48377 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms