Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.45□□□□□ -0.42
HttP42859 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.45□□□□□ -0.42
HttP42859 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
HttP42859 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.45□□□□□ -0.42
HttP42859 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.45□□□□□ -0.42
HttP42859 Gm4943-201ENSMUST00000132879 424 ntBASIC12.45□□□□□ -0.42
HttP42859 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.45□□□□□ -0.42
HttP42859 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.45□□□□□ -0.42
HttP42859 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.45□□□□□ -0.42
HttP42859 AC164556.1-201ENSMUST00000221318 751 ntBASIC12.45□□□□□ -0.42
HttP42859 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
HttP42859 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC12.45□□□□□ -0.42
HttP42859 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
HttP42859 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm8873-201ENSMUST00000217847 1439 ntBASIC12.44□□□□□ -0.42
HttP42859 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm22937-201ENSMUST00000103954 131 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm11993-201ENSMUST00000121861 820 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.44□□□□□ -0.42
HttP42859 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm28937-201ENSMUST00000185413 695 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm29400-201ENSMUST00000187208 695 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm28662-201ENSMUST00000188446 695 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm28251-201ENSMUST00000188835 695 ntBASIC12.44□□□□□ -0.42
HttP42859 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm37318-201ENSMUST00000194325 695 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm38017-201ENSMUST00000194768 695 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm37287-201ENSMUST00000195449 695 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm37793-201ENSMUST00000195548 695 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.44□□□□□ -0.42
HttP42859 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.44□□□□□ -0.42
HttP42859 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.44□□□□□ -0.42
HttP42859 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HttP42859 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm22661-201ENSMUST00000104192 132 ntBASIC12.44□□□□□ -0.42
HttP42859 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.44□□□□□ -0.42
HttP42859 Gm6441-201ENSMUST00000120983 696 ntBASIC12.44□□□□□ -0.42
HttP42859 Gm44882-201ENSMUST00000205702 802 ntBASIC12.44□□□□□ -0.42
HttP42859 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HttP42859 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.44□□□□□ -0.42
HttP42859 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
HttP42859 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
HttP42859 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HttP42859 Gm5071-201ENSMUST00000104922 1035 ntBASIC12.44□□□□□ -0.42
HttP42859 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC12.44□□□□□ -0.42
HttP42859 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
HttP42859 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
HttP42859 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
HttP42859 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.43□□□□□ -0.42
HttP42859 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
HttP42859 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HttP42859 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
HttP42859 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
HttP42859 Gm15617-201ENSMUST00000118973 771 ntBASIC12.43□□□□□ -0.42
HttP42859 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
HttP42859 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC12.43□□□□□ -0.42
HttP42859 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.43□□□□□ -0.42
HttP42859 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.43□□□□□ -0.42
HttP42859 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.43□□□□□ -0.42
HttP42859 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.43□□□□□ -0.42
HttP42859 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.43□□□□□ -0.42
HttP42859 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
HttP42859 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms