Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.37□□□□□ -0.59
Sox6P40645 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.37□□□□□ -0.59
Sox6P40645 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sox6P40645 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sox6P40645 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Sox6P40645 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox6P40645 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sox6P40645 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.36□□□□□ -0.59
Sox6P40645 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox6P40645 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.36□□□□□ -0.59
Sox6P40645 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.36□□□□□ -0.59
Sox6P40645 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.36□□□□□ -0.59
Sox6P40645 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.36□□□□□ -0.59
Sox6P40645 Gm8738-201ENSMUST00000172606 329 ntBASIC11.36□□□□□ -0.59
Sox6P40645 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Sox6P40645 Gm27572-201ENSMUST00000183702 255 ntBASIC11.36□□□□□ -0.59
Sox6P40645 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.36□□□□□ -0.59
Sox6P40645 Gm45880-201ENSMUST00000213041 853 ntBASIC11.36□□□□□ -0.59
Sox6P40645 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.36□□□□□ -0.59
Sox6P40645 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Sox6P40645 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox6P40645 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sox6P40645 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Sox6P40645 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.36□□□□□ -0.59
Sox6P40645 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sox6P40645 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox6P40645 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Sox6P40645 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Sox6P40645 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Sox6P40645 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Sox6P40645 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox6P40645 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Gm6023-201ENSMUST00000118217 606 ntBASIC11.35□□□□□ -0.59
Sox6P40645 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.35□□□□□ -0.59
Sox6P40645 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.35□□□□□ -0.59
Sox6P40645 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Sox6P40645 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.35□□□□□ -0.59
Sox6P40645 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.35□□□□□ -0.59
Sox6P40645 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.35□□□□□ -0.59
Sox6P40645 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sox6P40645 Gm10478-201ENSMUST00000084451 396 ntBASIC11.35□□□□□ -0.59
Sox6P40645 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sox6P40645 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.35□□□□□ -0.59
Sox6P40645 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Sox6P40645 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sox6P40645 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms