Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
VhlP40338 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.92□□□□□ -0.82
VhlP40338 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
VhlP40338 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
VhlP40338 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.92□□□□□ -0.82
VhlP40338 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Mup-ps23-201ENSMUST00000118063 630 ntBASIC9.92□□□□□ -0.82
VhlP40338 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.92□□□□□ -0.82
VhlP40338 Gm12138-201ENSMUST00000122180 951 ntBASIC9.92□□□□□ -0.82
VhlP40338 Mir1894-201ENSMUST00000122802 81 ntBASIC9.92□□□□□ -0.82
VhlP40338 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.92□□□□□ -0.82
VhlP40338 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
VhlP40338 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Gm42693-201ENSMUST00000196779 631 ntBASIC9.92□□□□□ -0.82
VhlP40338 Gm5904-201ENSMUST00000210286 865 ntBASIC9.92□□□□□ -0.82
VhlP40338 Gm29705-201ENSMUST00000212598 474 ntBASIC9.92□□□□□ -0.82
VhlP40338 Gm7653-201ENSMUST00000214567 508 ntBASIC9.92□□□□□ -0.82
VhlP40338 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
VhlP40338 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
VhlP40338 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
VhlP40338 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
VhlP40338 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
VhlP40338 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
VhlP40338 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
VhlP40338 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.91□□□□□ -0.82
VhlP40338 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.91□□□□□ -0.82
VhlP40338 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
VhlP40338 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
VhlP40338 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VhlP40338 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
VhlP40338 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
VhlP40338 Gm12490-201ENSMUST00000120255 560 ntBASIC9.91□□□□□ -0.82
VhlP40338 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
VhlP40338 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Gm18187-201ENSMUST00000196476 984 ntBASIC9.91□□□□□ -0.82
VhlP40338 Gm43433-201ENSMUST00000196573 481 ntBASIC9.91□□□□□ -0.82
VhlP40338 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Gm10076-201ENSMUST00000073238 384 ntBASIC9.91□□□□□ -0.82
VhlP40338 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
VhlP40338 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.91□□□□□ -0.82
VhlP40338 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VhlP40338 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.91□□□□□ -0.82
VhlP40338 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VhlP40338 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
VhlP40338 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VhlP40338 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VhlP40338 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
VhlP40338 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
VhlP40338 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VhlP40338 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
VhlP40338 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VhlP40338 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms