Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm26315-201ENSMUST00000083890 321 ntBASIC10.41□□□□□ -0.74
Slc6a1P31648 Gm8420-201ENSMUST00000097103 598 ntBASIC10.41□□□□□ -0.74
Slc6a1P31648 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a1P31648 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a1P31648 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a1P31648 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.41□□□□□ -0.74
Slc6a1P31648 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a1P31648 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a1P31648 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a1P31648 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Slc6a1P31648 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a1P31648 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a1P31648 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a1P31648 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a1P31648 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc6a1P31648 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.41□□□□□ -0.74
Slc6a1P31648 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Slc6a1P31648 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.4□□□□□ -0.74
Slc6a1P31648 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm8213-201ENSMUST00000118191 441 ntBASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm11439-201ENSMUST00000118598 409 ntBASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm15703-201ENSMUST00000120250 880 ntBASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm6152-201ENSMUST00000151704 340 ntBASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm29649-201ENSMUST00000185649 419 ntBASIC10.4□□□□□ -0.74
Slc6a1P31648 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Gm44882-201ENSMUST00000205702 802 ntBASIC10.4□□□□□ -0.74
Slc6a1P31648 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.4□□□□□ -0.74
Slc6a1P31648 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc6a1P31648 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc6a1P31648 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc6a1P31648 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Slc6a1P31648 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.4□□□□□ -0.75
Slc6a1P31648 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Slc6a1P31648 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.4□□□□□ -0.75
Slc6a1P31648 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc6a1P31648 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc6a1P31648 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Slc6a1P31648 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
Slc6a1P31648 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Slc6a1P31648 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Slc6a1P31648 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Slc6a1P31648 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Slc6a1P31648 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm5687-201ENSMUST00000118252 640 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Snora78-201ENSMUST00000158630 128 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.39□□□□□ -0.75
Slc6a1P31648 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm24196-201ENSMUST00000179161 110 ntBASIC10.39□□□□□ -0.75
Slc6a1P31648 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.39□□□□□ -0.75
Slc6a1P31648 Gm43438-201ENSMUST00000198133 379 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms