Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Gm15566-201ENSMUST00000121130 590 ntBASIC12.9□□□□□ -0.34
Mmp3P28862 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Gm15881-201ENSMUST00000148792 942 ntBASIC12.9□□□□□ -0.34
Mmp3P28862 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.9□□□□□ -0.34
Mmp3P28862 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.9□□□□□ -0.34
Mmp3P28862 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.9□□□□□ -0.34
Mmp3P28862 Gm2553-201ENSMUST00000215986 605 ntBASIC12.9□□□□□ -0.34
Mmp3P28862 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.9□□□□□ -0.34
Mmp3P28862 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.9□□□□□ -0.34
Mmp3P28862 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.9□□□□□ -0.34
Mmp3P28862 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Mmp3P28862 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Mmp3P28862 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Mmp3P28862 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Mmp3P28862 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.9□□□□□ -0.35
Mmp3P28862 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
Mmp3P28862 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm11667-201ENSMUST00000119828 486 ntBASIC12.89□□□□□ -0.35
Mmp3P28862 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.89□□□□□ -0.35
Mmp3P28862 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.89□□□□□ -0.35
Mmp3P28862 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Mmp3P28862 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Mmp3P28862 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.89□□□□□ -0.35
Mmp3P28862 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Mmp3P28862 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Mmp3P28862 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.89□□□□□ -0.35
Mmp3P28862 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.88□□□□□ -0.35
Mmp3P28862 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Gm13916-201ENSMUST00000117368 628 ntBASIC12.88□□□□□ -0.35
Mmp3P28862 Gm8731-201ENSMUST00000118088 412 ntBASIC12.88□□□□□ -0.35
Mmp3P28862 Gm12029-201ENSMUST00000120073 832 ntBASIC12.88□□□□□ -0.35
Mmp3P28862 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.88□□□□□ -0.35
Mmp3P28862 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.88□□□□□ -0.35
Mmp3P28862 Gm6867-201ENSMUST00000219165 425 ntBASIC12.88□□□□□ -0.35
Mmp3P28862 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.88□□□□□ -0.35
Mmp3P28862 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Mmp3P28862 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Mmp3P28862 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 128.5 ms