Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.69□□□□□ -0.54
Msx1P13297 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.69□□□□□ -0.54
Msx1P13297 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Msx1P13297 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.69□□□□□ -0.54
Msx1P13297 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Msx1P13297 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Msx1P13297 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.69□□□□□ -0.54
Msx1P13297 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msx1P13297 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Msx1P13297 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.68□□□□□ -0.54
Msx1P13297 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Msx1P13297 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.68□□□□□ -0.54
Msx1P13297 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.68□□□□□ -0.54
Msx1P13297 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.68□□□□□ -0.54
Msx1P13297 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Msx1P13297 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Gm12656-201ENSMUST00000118149 577 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Gm13996-201ENSMUST00000118456 430 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.68□□□□□ -0.54
Msx1P13297 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.68□□□□□ -0.54
Msx1P13297 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.68□□□□□ -0.54
Msx1P13297 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Gm42464-201ENSMUST00000196717 417 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC11.68□□□□□ -0.54
Msx1P13297 Gm19253-201ENSMUST00000204279 307 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Msx1P13297 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.68□□□□□ -0.54
Msx1P13297 Gm8712-201ENSMUST00000221090 701 ntBASIC11.68□□□□□ -0.54
Msx1P13297 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.68□□□□□ -0.54
Msx1P13297 AC133598.4-201ENSMUST00000224577 454 ntBASIC11.68□□□□□ -0.54
Msx1P13297 AC154424.1-201ENSMUST00000225883 799 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Gm22058-201ENSMUST00000083393 310 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.68□□□□□ -0.54
Msx1P13297 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Gm20541-201ENSMUST00000173035 1406 ntBASIC11.68□□□□□ -0.54
Msx1P13297 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msx1P13297 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Msx1P13297 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Mir706-201ENSMUST00000102262 84 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Msx1P13297 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Gm13611-201ENSMUST00000118269 318 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Gm12058-201ENSMUST00000118614 437 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Gm6461-201ENSMUST00000120015 633 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.67□□□□□ -0.54
Msx1P13297 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Msx1P13297 Gm25043-201ENSMUST00000158604 212 ntBASIC11.67□□□□□ -0.54
Msx1P13297 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Gm3650-201ENSMUST00000180600 747 ntBASIC11.67□□□□□ -0.54
Msx1P13297 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Msx1P13297 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC11.67□□□□□ -0.54
Msx1P13297 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms