Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa4P06798 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa4P06798 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Hoxa4P06798 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa4P06798 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa4P06798 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa4P06798 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa4P06798 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa4P06798 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa4P06798 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Hoxa4P06798 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm23596-201ENSMUST00000104304 132 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm11509-201ENSMUST00000117358 325 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm12857-201ENSMUST00000117678 592 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm14724-201ENSMUST00000118400 537 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm14277-201ENSMUST00000121195 360 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm16505-201ENSMUST00000179981 232 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm6114-201ENSMUST00000182472 968 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm9192-201ENSMUST00000183221 985 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm3332-201ENSMUST00000189337 928 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa4P06798 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.89□□□□□ -0.51
Hoxa4P06798 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.89□□□□□ -0.51
Hoxa4P06798 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa4P06798 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa4P06798 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.89□□□□□ -0.51
Hoxa4P06798 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.88□□□□□ -0.51
Hoxa4P06798 Gm14441-201ENSMUST00000121960 540 ntBASIC11.88□□□□□ -0.51
Hoxa4P06798 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.88□□□□□ -0.51
Hoxa4P06798 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa4P06798 Gm27552-201ENSMUST00000183351 62 ntBASIC11.88□□□□□ -0.51
Hoxa4P06798 Gm27844-201ENSMUST00000183613 62 ntBASIC11.88□□□□□ -0.51
Hoxa4P06798 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa4P06798 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms