Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P04214 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
P04214 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.57□□□□□ -0.4
P04214 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P04214 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P04214 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.56□□□□□ -0.4
P04214 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
P04214 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P04214 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.56□□□□□ -0.4
P04214 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.56□□□□□ -0.4
P04214 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
P04214 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.56□□□□□ -0.4
P04214 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P04214 Gm12948-201ENSMUST00000119406 682 ntBASIC12.56□□□□□ -0.4
P04214 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.56□□□□□ -0.4
P04214 Gm26989-201ENSMUST00000182608 749 ntBASIC12.56□□□□□ -0.4
P04214 Gm18561-201ENSMUST00000206027 804 ntBASIC12.56□□□□□ -0.4
P04214 Gm18204-201ENSMUST00000209835 793 ntBASIC12.56□□□□□ -0.4
P04214 Mt1-202ENSMUST00000211807 1085 ntBASIC12.56□□□□□ -0.4
P04214 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.56□□□□□ -0.4
P04214 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
P04214 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.56□□□□□ -0.4
P04214 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P04214 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P04214 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.56□□□□□ -0.4
P04214 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P04214 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.56□□□□□ -0.4
P04214 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.55□□□□□ -0.4
P04214 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.55□□□□□ -0.4
P04214 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
P04214 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
P04214 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Gm22146-201ENSMUST00000157397 288 ntBASIC12.55□□□□□ -0.4
P04214 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.55□□□□□ -0.4
P04214 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.55□□□□□ -0.4
P04214 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.55□□□□□ -0.4
P04214 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.55□□□□□ -0.4
P04214 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P04214 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04214 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
P04214 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.54□□□□□ -0.4
P04214 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P04214 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04214 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms