Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mir6927-201ENSMUST00000184494 71 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm19994-201ENSMUST00000217086 586 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.17□□□□□ -0.78
Hoxa3P02831 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.17□□□□□ -0.78
Hoxa3P02831 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hoxa3P02831 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.16□□□□□ -0.78
Hoxa3P02831 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.16□□□□□ -0.78
Hoxa3P02831 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm28450-201ENSMUST00000187349 638 ntBASIC10.16□□□□□ -0.78
Hoxa3P02831 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm45433-201ENSMUST00000209386 247 ntBASIC10.16□□□□□ -0.78
Hoxa3P02831 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.16□□□□□ -0.78
Hoxa3P02831 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.16□□□□□ -0.78
Hoxa3P02831 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.16□□□□□ -0.78
Hoxa3P02831 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hoxa3P02831 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hoxa3P02831 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms