Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Gzmn-202ENSMUST00000225535 989 ntBASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Igh-VJ558P01758 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Gm45598-202ENSMUST00000210719 986 ntBASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Igh-VJ558P01758 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.41□□□□□ -0.74
Igh-VJ558P01758 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms