Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.38□□□□□ -0.59
Matn4O89029 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.38□□□□□ -0.59
Matn4O89029 Gm28882-201ENSMUST00000185504 314 ntBASIC11.38□□□□□ -0.59
Matn4O89029 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.38□□□□□ -0.59
Matn4O89029 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.38□□□□□ -0.59
Matn4O89029 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Matn4O89029 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.38□□□□□ -0.59
Matn4O89029 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.38□□□□□ -0.59
Matn4O89029 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.38□□□□□ -0.59
Matn4O89029 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.38□□□□□ -0.59
Matn4O89029 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.38□□□□□ -0.59
Matn4O89029 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn4O89029 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.38□□□□□ -0.59
Matn4O89029 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.38□□□□□ -0.59
Matn4O89029 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.37□□□□□ -0.59
Matn4O89029 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Matn4O89029 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Matn4O89029 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.37□□□□□ -0.59
Matn4O89029 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
Matn4O89029 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Matn4O89029 Gm14441-201ENSMUST00000121960 540 ntBASIC11.37□□□□□ -0.59
Matn4O89029 Gm13316-201ENSMUST00000140537 691 ntBASIC11.37□□□□□ -0.59
Matn4O89029 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.37□□□□□ -0.59
Matn4O89029 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Gm38241-201ENSMUST00000192641 898 ntBASIC11.37□□□□□ -0.59
Matn4O89029 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.37□□□□□ -0.59
Matn4O89029 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.37□□□□□ -0.59
Matn4O89029 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Matn4O89029 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.37□□□□□ -0.59
Matn4O89029 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.37□□□□□ -0.59
Matn4O89029 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Matn4O89029 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.37□□□□□ -0.59
Matn4O89029 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.37□□□□□ -0.59
Matn4O89029 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Matn4O89029 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Matn4O89029 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Matn4O89029 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Matn4O89029 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.36□□□□□ -0.59
Matn4O89029 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Matn4O89029 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.36□□□□□ -0.59
Matn4O89029 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.36□□□□□ -0.59
Matn4O89029 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Matn4O89029 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Gm12390-201ENSMUST00000117897 397 ntBASIC11.36□□□□□ -0.59
Matn4O89029 Gm15610-201ENSMUST00000120584 195 ntBASIC11.36□□□□□ -0.59
Matn4O89029 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Matn4O89029 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.36□□□□□ -0.59
Matn4O89029 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Matn4O89029 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.36□□□□□ -0.59
Matn4O89029 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.36□□□□□ -0.59
Matn4O89029 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.36□□□□□ -0.59
Matn4O89029 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Matn4O89029 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Matn4O89029 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn4O89029 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.36□□□□□ -0.59
Matn4O89029 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms