Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Psmc3O88685 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Psmc3O88685 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Psmc3O88685 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.81□□□□□ -0.36
Psmc3O88685 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Psmc3O88685 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Psmc3O88685 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.81□□□□□ -0.36
Psmc3O88685 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Psmc3O88685 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Psmc3O88685 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Psmc3O88685 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Psmc3O88685 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Psmc3O88685 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Psmc3O88685 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Psmc3O88685 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.8□□□□□ -0.36
Psmc3O88685 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Psmc3O88685 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.8□□□□□ -0.36
Psmc3O88685 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Gm11628-201ENSMUST00000117568 171 ntBASIC12.8□□□□□ -0.36
Psmc3O88685 Gm7722-201ENSMUST00000120646 741 ntBASIC12.8□□□□□ -0.36
Psmc3O88685 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.8□□□□□ -0.36
Psmc3O88685 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Gm27530-201ENSMUST00000184096 98 ntBASIC12.8□□□□□ -0.36
Psmc3O88685 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.8□□□□□ -0.36
Psmc3O88685 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Psmc3O88685 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.8□□□□□ -0.36
Psmc3O88685 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.8□□□□□ -0.36
Psmc3O88685 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Psmc3O88685 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Psmc3O88685 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Psmc3O88685 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Psmc3O88685 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Psmc3O88685 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Psmc3O88685 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Psmc3O88685 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 Gm14460-201ENSMUST00000121511 639 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.79□□□□□ -0.36
Psmc3O88685 Gm8100-201ENSMUST00000182906 988 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Psmc3O88685 Gm10288-201ENSMUST00000084614 537 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Psmc3O88685 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Matn2-203ENSMUST00000226766 3252 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.79□□□□□ -0.36
Psmc3O88685 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.79□□□□□ -0.36
Psmc3O88685 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.79□□□□□ -0.36
Psmc3O88685 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Psmc3O88685 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Psmc3O88685 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Psmc3O88685 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Psmc3O88685 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.78□□□□□ -0.36
Psmc3O88685 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Psmc3O88685 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Psmc3O88685 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Psmc3O88685 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Psmc3O88685 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Psmc3O88685 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Psmc3O88685 Gm12857-201ENSMUST00000117678 592 ntBASIC12.78□□□□□ -0.36
Psmc3O88685 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms