Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Cops4O88544 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.15□□□□□ -0.63
Cops4O88544 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Cops4O88544 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.14□□□□□ -0.63
Cops4O88544 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.14□□□□□ -0.63
Cops4O88544 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cops4O88544 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Cops4O88544 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.14□□□□□ -0.63
Cops4O88544 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.14□□□□□ -0.63
Cops4O88544 Gm24196-201ENSMUST00000179161 110 ntBASIC11.14□□□□□ -0.63
Cops4O88544 Gm8652-201ENSMUST00000181363 964 ntBASIC11.14□□□□□ -0.63
Cops4O88544 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.14□□□□□ -0.63
Cops4O88544 Gm27839-201ENSMUST00000184242 106 ntBASIC11.14□□□□□ -0.63
Cops4O88544 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.14□□□□□ -0.63
Cops4O88544 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.14□□□□□ -0.63
Cops4O88544 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.14□□□□□ -0.63
Cops4O88544 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Cops4O88544 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.14□□□□□ -0.63
Cops4O88544 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cops4O88544 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cops4O88544 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.14□□□□□ -0.63
Cops4O88544 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cops4O88544 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Cops4O88544 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
Cops4O88544 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cops4O88544 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.13□□□□□ -0.63
Cops4O88544 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cops4O88544 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Gm12490-201ENSMUST00000120255 560 ntBASIC11.13□□□□□ -0.63
Cops4O88544 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.13□□□□□ -0.63
Cops4O88544 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Gm22331-201ENSMUST00000158066 136 ntBASIC11.13□□□□□ -0.63
Cops4O88544 Gm9022-201ENSMUST00000182482 992 ntBASIC11.13□□□□□ -0.63
Cops4O88544 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.13□□□□□ -0.63
Cops4O88544 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cops4O88544 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cops4O88544 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.13□□□□□ -0.63
Cops4O88544 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cops4O88544 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms