Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.24□□□□□ -0.61
BckdkO55028 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.24□□□□□ -0.61
BckdkO55028 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.24□□□□□ -0.61
BckdkO55028 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.24□□□□□ -0.61
BckdkO55028 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
BckdkO55028 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.24□□□□□ -0.61
BckdkO55028 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
BckdkO55028 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.24□□□□□ -0.61
BckdkO55028 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
BckdkO55028 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.24□□□□□ -0.61
BckdkO55028 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.24□□□□□ -0.61
BckdkO55028 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.24□□□□□ -0.61
BckdkO55028 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
BckdkO55028 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.23□□□□□ -0.61
BckdkO55028 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.23□□□□□ -0.61
BckdkO55028 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Gm35960-201ENSMUST00000202712 767 ntBASIC11.23□□□□□ -0.61
BckdkO55028 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.23□□□□□ -0.61
BckdkO55028 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
BckdkO55028 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.23□□□□□ -0.61
BckdkO55028 Map1b-203ENSMUST00000223725 2669 ntBASIC11.22□□□□□ -0.61
BckdkO55028 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
BckdkO55028 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.22□□□□□ -0.61
BckdkO55028 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
BckdkO55028 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
BckdkO55028 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
BckdkO55028 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
BckdkO55028 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.22□□□□□ -0.61
BckdkO55028 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.22□□□□□ -0.61
BckdkO55028 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.22□□□□□ -0.61
BckdkO55028 Gm26361-201ENSMUST00000158868 186 ntBASIC11.22□□□□□ -0.61
BckdkO55028 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
BckdkO55028 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
BckdkO55028 Gm8885-201ENSMUST00000189382 598 ntBASIC11.22□□□□□ -0.61
BckdkO55028 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.22□□□□□ -0.61
BckdkO55028 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.22□□□□□ -0.61
BckdkO55028 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms