Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Gm26684-202ENSMUST00000228229 8257 ntBASIC14.34□□□□□ -0.11
Smarce1O54941 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.34□□□□□ -0.11
Smarce1O54941 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.34□□□□□ -0.11
Smarce1O54941 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smarce1O54941 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.34□□□□□ -0.11
Smarce1O54941 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.34□□□□□ -0.11
Smarce1O54941 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.34□□□□□ -0.11
Smarce1O54941 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarce1O54941 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarce1O54941 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarce1O54941 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.33□□□□□ -0.11
Smarce1O54941 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Smarce1O54941 Rgr-203ENSMUST00000225070 4704 ntBASIC14.33□□□□□ -0.11
Smarce1O54941 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarce1O54941 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smarce1O54941 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Smarce1O54941 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarce1O54941 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarce1O54941 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Smarce1O54941 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smarce1O54941 Gm13875-201ENSMUST00000120162 282 ntBASIC14.33□□□□□ -0.12
Smarce1O54941 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.33□□□□□ -0.12
Smarce1O54941 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarce1O54941 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.33□□□□□ -0.12
Smarce1O54941 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.33□□□□□ -0.12
Smarce1O54941 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Gm6266-201ENSMUST00000203844 806 ntBASIC14.33□□□□□ -0.12
Smarce1O54941 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.33□□□□□ -0.12
Smarce1O54941 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.33□□□□□ -0.12
Smarce1O54941 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smarce1O54941 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smarce1O54941 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smarce1O54941 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarce1O54941 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarce1O54941 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.32□□□□□ -0.12
Smarce1O54941 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Gm6023-201ENSMUST00000118217 606 ntBASIC14.32□□□□□ -0.12
Smarce1O54941 Gm14247-201ENSMUST00000120950 237 ntBASIC14.32□□□□□ -0.12
Smarce1O54941 Gm8602-201ENSMUST00000184045 607 ntBASIC14.32□□□□□ -0.12
Smarce1O54941 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Gm45784-201ENSMUST00000188360 142 ntBASIC14.32□□□□□ -0.12
Smarce1O54941 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarce1O54941 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.32□□□□□ -0.12
Smarce1O54941 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarce1O54941 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.32□□□□□ -0.12
Smarce1O54941 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms