Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Npc1O35604 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Npc1O35604 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Npc1O35604 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Gm12997-201ENSMUST00000120207 640 ntBASIC11.81□□□□□ -0.52
Npc1O35604 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Npc1O35604 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.81□□□□□ -0.52
Npc1O35604 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.81□□□□□ -0.52
Npc1O35604 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Npc1O35604 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Gm18711-201ENSMUST00000199341 750 ntBASIC11.81□□□□□ -0.52
Npc1O35604 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Npc1O35604 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Npc1O35604 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Npc1O35604 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.81□□□□□ -0.52
Npc1O35604 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Npc1O35604 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Npc1O35604 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.8□□□□□ -0.52
Npc1O35604 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.8□□□□□ -0.52
Npc1O35604 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.8□□□□□ -0.52
Npc1O35604 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Npc1O35604 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.8□□□□□ -0.52
Npc1O35604 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Gm11989-201ENSMUST00000117240 672 ntBASIC11.8□□□□□ -0.52
Npc1O35604 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Npc1O35604 Gm11362-201ENSMUST00000118838 850 ntBASIC11.8□□□□□ -0.52
Npc1O35604 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.8□□□□□ -0.52
Npc1O35604 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.8□□□□□ -0.52
Npc1O35604 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Npc1O35604 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.8□□□□□ -0.52
Npc1O35604 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.8□□□□□ -0.52
Npc1O35604 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Gm44882-201ENSMUST00000205702 802 ntBASIC11.8□□□□□ -0.52
Npc1O35604 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.8□□□□□ -0.52
Npc1O35604 Gm45433-201ENSMUST00000209386 247 ntBASIC11.8□□□□□ -0.52
Npc1O35604 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Npc1O35604 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Npc1O35604 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Npc1O35604 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Npc1O35604 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Npc1O35604 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Npc1O35604 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms