Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Gm13492-201ENSMUST00000119772 665 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Gm12036-201ENSMUST00000120008 530 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.55□□□□□ -0.88
Efnb3O35393 Gm8652-201ENSMUST00000181363 964 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Gm27839-201ENSMUST00000184242 106 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC9.55□□□□□ -0.88
Efnb3O35393 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.55□□□□□ -0.88
Efnb3O35393 Gm43433-201ENSMUST00000196573 481 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.55□□□□□ -0.88
Efnb3O35393 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Efnb3O35393 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Efnb3O35393 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.55□□□□□ -0.88
Efnb3O35393 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.55□□□□□ -0.88
Efnb3O35393 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.55□□□□□ -0.88
Efnb3O35393 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Efnb3O35393 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.55□□□□□ -0.88
Efnb3O35393 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Efnb3O35393 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.54□□□□□ -0.88
Efnb3O35393 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Efnb3O35393 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm12203-201ENSMUST00000118235 598 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Gm11803-201ENSMUST00000119966 444 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Gm12209-201ENSMUST00000120089 596 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm12363-201ENSMUST00000122250 668 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm24644-201ENSMUST00000157114 139 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.54□□□□□ -0.88
Efnb3O35393 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm8810-201ENSMUST00000172895 754 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm8602-201ENSMUST00000184045 607 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Gm29649-201ENSMUST00000185649 419 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Gm18304-201ENSMUST00000189162 546 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.54□□□□□ -0.88
Efnb3O35393 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.54□□□□□ -0.88
Efnb3O35393 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Efnb3O35393 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.54□□□□□ -0.88
Efnb3O35393 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Efnb3O35393 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms