Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm29410-201ENSMUST00000188383 694 ntBASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm29499-201ENSMUST00000189151 486 ntBASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm28329-201ENSMUST00000191208 689 ntBASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm29171-201ENSMUST00000191397 486 ntBASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm18059-201ENSMUST00000208073 580 ntBASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm45575-201ENSMUST00000210283 548 ntBASIC14.57□□□□□ -0.08
NpcdF8VQB8 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm23680-201ENSMUST00000083162 164 ntBASIC14.57□□□□□ -0.08
NpcdF8VQB8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NpcdF8VQB8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Mir671-201ENSMUST00000102432 98 ntBASIC14.56□□□□□ -0.08
NpcdF8VQB8 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.56□□□□□ -0.08
NpcdF8VQB8 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Gm23119-201ENSMUST00000158610 140 ntBASIC14.56□□□□□ -0.08
NpcdF8VQB8 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.56□□□□□ -0.08
NpcdF8VQB8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Gm37458-201ENSMUST00000194055 410 ntBASIC14.56□□□□□ -0.08
NpcdF8VQB8 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Gm45500-201ENSMUST00000211676 803 ntBASIC14.56□□□□□ -0.08
NpcdF8VQB8 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.56□□□□□ -0.08
NpcdF8VQB8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.56□□□□□ -0.08
NpcdF8VQB8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.56□□□□□ -0.08
NpcdF8VQB8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm24398-201ENSMUST00000157870 109 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm8815-201ENSMUST00000173809 620 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm43610-201ENSMUST00000199117 365 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm9797-202ENSMUST00000218003 294 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm9661-201ENSMUST00000221611 1122 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 AC136376.2-201ENSMUST00000228819 490 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm5705-201ENSMUST00000066241 711 ntBASIC14.55□□□□□ -0.08
NpcdF8VQB8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NpcdF8VQB8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms