Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm9673-201ENSMUST00000119287 781 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm12791-201ENSMUST00000120788 655 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm22846-201ENSMUST00000157706 270 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm25554-201ENSMUST00000158075 113 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm7504-201ENSMUST00000201449 424 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm6423-201ENSMUST00000204315 934 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm45856-201ENSMUST00000212752 416 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.36□□□□□ -0.59
Colca2F8VPY8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Colca2F8VPY8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Gm17192-201ENSMUST00000169031 511 ntBASIC11.35□□□□□ -0.59
Colca2F8VPY8 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.35□□□□□ -0.59
Colca2F8VPY8 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.35□□□□□ -0.59
Colca2F8VPY8 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.35□□□□□ -0.59
Colca2F8VPY8 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.35□□□□□ -0.59
Colca2F8VPY8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Colca2F8VPY8 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.35□□□□□ -0.59
Colca2F8VPY8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.34□□□□□ -0.59
Colca2F8VPY8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms