Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm24845-201ENSMUST00000158034 109 ntBASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm18054-201ENSMUST00000207539 555 ntBASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm9823-201ENSMUST00000051212 327 ntBASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh9F8VPK8 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm5706-201ENSMUST00000181525 993 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm38158-201ENSMUST00000194617 339 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm42627-201ENSMUST00000197347 224 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm17931-201ENSMUST00000208132 634 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm9996-201ENSMUST00000070359 913 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm10478-201ENSMUST00000084451 396 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh9F8VPK8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm43118-201ENSMUST00000199149 775 ntBASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 Gm19994-201ENSMUST00000217086 586 ntBASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh9F8VPK8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms