Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm22138-201ENSMUST00000158748 128 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Mir7076-201ENSMUST00000183519 74 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm44980-201ENSMUST00000205826 314 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm6108-201ENSMUST00000208365 367 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.47□□□□□ -0.09
Ube4aE9Q735 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4aE9Q735 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Gm11783-201ENSMUST00000119549 885 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 Gm3150-201ENSMUST00000166418 204 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 Gm18367-201ENSMUST00000176139 600 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 Gm12407-201ENSMUST00000180219 324 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.46□□□□□ -0.09
Ube4aE9Q735 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4aE9Q735 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4aE9Q735 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4aE9Q735 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Ube4aE9Q735 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.46□□□□□ -0.1
Ube4aE9Q735 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4aE9Q735 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14.46□□□□□ -0.1
Ube4aE9Q735 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4aE9Q735 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4aE9Q735 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm16071-201ENSMUST00000119589 793 ntBASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm17826-201ENSMUST00000189720 798 ntBASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm38151-201ENSMUST00000195085 289 ntBASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm45113-201ENSMUST00000207518 165 ntBASIC14.45□□□□□ -0.1
Ube4aE9Q735 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.45□□□□□ -0.1
Ube4aE9Q735 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4aE9Q735 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Ube4aE9Q735 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms