Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh17E9PXF0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh17E9PXF0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh17E9PXF0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh17E9PXF0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Gm8959-201ENSMUST00000213150 571 ntBASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.29□□□□□ -0.6
Pcdh17E9PXF0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm43962-201ENSMUST00000203898 190 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm26035-201ENSMUST00000083065 308 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh17E9PXF0 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms