Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm26286-201ENSMUST00000104166 134 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm24891-201ENSMUST00000104391 136 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm7851-201ENSMUST00000117574 323 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm3508-201ENSMUST00000186012 792 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm5733-201ENSMUST00000190232 939 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm29787-201ENSMUST00000222129 849 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Srp54bE9PXC0 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.95□□□□□ -0.5
Srp54bE9PXC0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gm12857-201ENSMUST00000117678 592 ntBASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gm23085-201ENSMUST00000157849 293 ntBASIC11.94□□□□□ -0.5
Srp54bE9PXC0 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.94□□□□□ -0.5
Srp54bE9PXC0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.94□□□□□ -0.5
Srp54bE9PXC0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Srp54bE9PXC0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Gm11509-201ENSMUST00000117358 325 ntBASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Gm14724-201ENSMUST00000118400 537 ntBASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.93□□□□□ -0.5
Srp54bE9PXC0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Gm10051-201ENSMUST00000145209 414 ntBASIC11.93□□□□□ -0.5
Srp54bE9PXC0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Srp54bE9PXC0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms