Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Gm7150-201ENSMUST00000122032 981 ntBASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.36□□□□□ -0.27
Scn3aA2ASI5 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn3aA2ASI5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm15782-201ENSMUST00000121073 445 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm11244-201ENSMUST00000121243 237 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm20495-201ENSMUST00000173902 235 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm9132-201ENSMUST00000210182 832 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm4654-201ENSMUST00000183305 982 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm27390-201ENSMUST00000184516 176 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm38210-201ENSMUST00000191944 809 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm2875-201ENSMUST00000211333 360 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm5451-201ENSMUST00000080545 579 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.35□□□□□ -0.27
Scn3aA2ASI5 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn3aA2ASI5 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn3aA2ASI5 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms