Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc112A0AUP1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm10434-201ENSMUST00000101158 471 ntBASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm22018-201ENSMUST00000104357 131 ntBASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm25043-201ENSMUST00000158604 212 ntBASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm2546-201ENSMUST00000182630 991 ntBASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm27514-201ENSMUST00000183692 110 ntBASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Gm37008-201ENSMUST00000195712 319 ntBASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc112A0AUP1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc112A0AUP1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc112A0AUP1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc112A0AUP1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccdc112A0AUP1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
Ccdc112A0AUP1 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm6023-201ENSMUST00000118217 606 ntBASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm11424-201ENSMUST00000121929 829 ntBASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm5706-201ENSMUST00000181525 993 ntBASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc112A0AUP1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms