Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm14350-201ENSMUST00000116642 640 ntBASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm15429-201ENSMUST00000151268 798 ntBASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.15□□□□□ -0.94
Trav3n-3A0A0G2JEM0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms