Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC8.64□□□□□ -1.03
Trav8-1A0A075B641 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 AC129336.1-201ENSMUST00000220224 2277 ntBASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 AC098716.1-201ENSMUST00000213527 703 ntBASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trav8-1A0A075B641 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm45828-201ENSMUST00000206938 1836 ntBASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm14701-201ENSMUST00000117156 348 ntBASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trav8-1A0A075B641 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms