Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm13736-201ENSMUST00000119272 253 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm17150-201ENSMUST00000165577 381 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm8602-201ENSMUST00000184045 607 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb3S4R1G7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Gm13342-201ENSMUST00000121055 207 ntBASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Gm11424-201ENSMUST00000121929 829 ntBASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Gm24548-201ENSMUST00000158650 108 ntBASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.9□□□□□ -0.66
H2afb3S4R1G7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Rgr-203ENSMUST00000225070 4704 ntBASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H2afb3S4R1G7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H2afb3S4R1G7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms