Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm27341-201ENSMUST00000183570 106 ntBASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 AA914427-201ENSMUST00000193194 1166 ntBASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.2□□□□□ -0.46
Mrpl40Q9Z2Q5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm14109-201ENSMUST00000118814 309 ntBASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm3786-201ENSMUST00000202659 378 ntBASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm35960-201ENSMUST00000202712 767 ntBASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.19□□□□□ -0.46
Mrpl40Q9Z2Q5 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm13570-201ENSMUST00000140763 309 ntBASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm27023-201ENSMUST00000182372 285 ntBASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm43138-201ENSMUST00000199123 708 ntBASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Gm44262-201ENSMUST00000204969 372 ntBASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Mrpl40Q9Z2Q5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms