Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ClcnkaQ9WUB7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Mir1938-201ENSMUST00000158746 100 ntBASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Gm38266-201ENSMUST00000194931 421 ntBASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Gm30285-201ENSMUST00000214614 422 ntBASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ClcnkaQ9WUB7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Gm11222-201ENSMUST00000119005 738 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Mir8109-201ENSMUST00000184375 117 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
ClcnkaQ9WUB7 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms