Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Prpf40aQ9R1C7 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Map1b-203ENSMUST00000223725 2669 ntBASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Gm14723-201ENSMUST00000118686 215 ntBASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Gm31256-201ENSMUST00000194705 506 ntBASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Gm38341-201ENSMUST00000195357 515 ntBASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf40aQ9R1C7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf40aQ9R1C7 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms