Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Clcn2Q9R0A1 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Clcn2Q9R0A1 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.4□□□□□ -0.43
Clcn2Q9R0A1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
Clcn2Q9R0A1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clcn2Q9R0A1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clcn2Q9R0A1 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Clcn2Q9R0A1 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.4□□□□□ -0.43
Clcn2Q9R0A1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm15370-201ENSMUST00000117158 253 ntBASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm14723-201ENSMUST00000118686 215 ntBASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm4986-201ENSMUST00000119731 549 ntBASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm27243-201ENSMUST00000183964 521 ntBASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Gm45865-201ENSMUST00000211815 945 ntBASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Clcn2Q9R0A1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm13736-201ENSMUST00000119272 253 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Mir6420-201ENSMUST00000185032 102 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm6621-201ENSMUST00000193251 772 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm9368-201ENSMUST00000219348 831 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Cts7-204ENSMUST00000225321 1257 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm22058-201ENSMUST00000083393 310 ntBASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Clcn2Q9R0A1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Gm22323-201ENSMUST00000103832 109 ntBASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clcn2Q9R0A1 Gm6334-201ENSMUST00000207083 228 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms