Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm25214-201ENSMUST00000104573 129 ntBASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm13875-201ENSMUST00000120162 282 ntBASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm29199-201ENSMUST00000187766 775 ntBASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Mir433-201ENSMUST00000093564 124 ntBASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.03□□□□□ -0.48
Tubb3Q9ERD7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubb3Q9ERD7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubb3Q9ERD7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubb3Q9ERD7 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.02□□□□□ -0.48
Tubb3Q9ERD7 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubb3Q9ERD7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.02□□□□□ -0.48
Tubb3Q9ERD7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tubb3Q9ERD7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.02□□□□□ -0.48
Tubb3Q9ERD7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Rmrp-201ENSMUST00000157463 271 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm44405-201ENSMUST00000198952 126 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm5950-201ENSMUST00000213337 772 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tubb3Q9ERD7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms