Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cpne8Q9DC53 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne8Q9DC53 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cpne8Q9DC53 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cpne8Q9DC53 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne8Q9DC53 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cpne8Q9DC53 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cpne8Q9DC53 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cpne8Q9DC53 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Gm2991-201ENSMUST00000173338 480 ntBASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Gm18711-201ENSMUST00000199341 750 ntBASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne8Q9DC53 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Gm12036-201ENSMUST00000120008 530 ntBASIC12.57□□□□□ -0.4
Cpne8Q9DC53 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cpne8Q9DC53 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.56□□□□□ -0.4
Cpne8Q9DC53 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms