Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gm15808-201ENSMUST00000119046 604 ntBASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gm44124-201ENSMUST00000204159 472 ntBASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Gm44262-201ENSMUST00000204969 372 ntBASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp2aQ9DB34 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm12015-201ENSMUST00000117065 843 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm11989-201ENSMUST00000117240 672 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm11362-201ENSMUST00000118838 850 ntBASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp2aQ9DB34 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms